Vibrio sp. UCD-FRSSP16_10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. UCD-FRSSP16_10 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of many Vibrio species. The accession number for this strain is LZFX00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. While specific phenotypic traits and ecological roles of Vibrio sp. UCD-FRSSP16_10 are not detailed in the provided data, Vibrio species are generally known to inhabit marine environments and are often associated with various ecological interactions, including those with marine organisms and in nutrient cycling. The single replicon trait may suggest an adaptation to specific environmental conditions, allowing for efficient replication and resource utilization. Understanding the genomic characteristics of Vibrio sp. UCD-FRSSP16_10 could provide insights into its ecological niche and potential interactions within marine ecosystems. Further investigation into its metabolic capabilities and ecological roles could enhance our knowledge of its contribution to marine biodiversity and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. UCD-FRSSP16_10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. UCD-FRSSP16_10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. UCD-FRSSP16_10 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

1050788 bp

Thymine Count

1035409 bp

Guanine Count

743775 bp

Cytosine Count

763929 bp

Genome Length

3593963 bp

Protein-coding Genes

3067 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl transferase family 1A9264_03835Not AvailablePositive2309790 - 231087239667.8
hypothetical proteinA9264_03840Not AvailablePositive2310873 - 231193440731.3
cmp-n-acetlyneuraminic acid synthetaseA9264_03845Not AvailableNegative2311931 - 231262926040.1
alcohol dehydrogenaseA9264_03850Not AvailableNegative2312626 - 231369039631.3
shikimate dehydrogenaseA9264_03855Not AvailableNegative2313717 - 231436722849.8
n-acetylneuraminate synthaseA9264_03860Not AvailableNegative2314360 - 231543338861.8
udp-n-acetyl-d-glucosamine 2-epimerase, udp-hydrolysingA9264_03865Not AvailableNegative2315441 - 231661342736.1
aminotransferase degtA9264_03870Not AvailableNegative2316624 - 231777842600.0
udp-n-acetylglucosamine 4,6-dehydrataseA9264_03875Not AvailableNegative2317791 - 231898145056.1
3-deoxy-d-manno-octulosonic acid transferaseA9264_03880Not AvailablePositive2319306 - 232058647774.1

Displaying genes 2071 – 2080 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.