Vibrio sp. UCD-FRSSP16_10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. UCD-FRSSP16_10 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of many Vibrio species. The accession number for this strain is LZFX00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. While specific phenotypic traits and ecological roles of Vibrio sp. UCD-FRSSP16_10 are not detailed in the provided data, Vibrio species are generally known to inhabit marine environments and are often associated with various ecological interactions, including those with marine organisms and in nutrient cycling. The single replicon trait may suggest an adaptation to specific environmental conditions, allowing for efficient replication and resource utilization. Understanding the genomic characteristics of Vibrio sp. UCD-FRSSP16_10 could provide insights into its ecological niche and potential interactions within marine ecosystems. Further investigation into its metabolic capabilities and ecological roles could enhance our knowledge of its contribution to marine biodiversity and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. UCD-FRSSP16_10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. UCD-FRSSP16_10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. UCD-FRSSP16_10 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

1050788 bp

Thymine Count

1035409 bp

Guanine Count

743775 bp

Cytosine Count

763929 bp

Genome Length

3593963 bp

Protein-coding Genes

3067 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
superoxide dismutaseA9264_14870Not AvailableNegative2103524 - 210410821484.1
monothiol glutaredoxin, grx4 familyA9264_14875Not AvailablePositive2104444 - 210477612223.7
sodium:proton antiporterA9264_14880Not AvailableNegative2104895 - 210622046154.3
ribonuclease tA9264_14885Not AvailableNegative2106242 - 210688623617.0
lactoylglutathione lyaseA9264_14890Not AvailableNegative2107036 - 210745215063.7
endonuclease iiiA9264_14895Not AvailableNegative2107489 - 210812423876.0
electron transport complex subunit rsxeA9264_14900Not AvailableNegative2108144 - 210883624955.4
electron transport complex subunit rsxgA9264_14905Not AvailableNegative2108836 - 210946522682.3
electron transport complex subunit rsxdA9264_14910Not AvailableNegative2109470 - 211051937306.7
electron transport complex subunit rsxcA9264_14915Not AvailableNegative2110519 - 211309591977.9

Displaying genes 1881 – 1890 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.