Vibrio sp. UCD-FRSSP16_10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. UCD-FRSSP16_10 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of many Vibrio species. The accession number for this strain is LZFX00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. While specific phenotypic traits and ecological roles of Vibrio sp. UCD-FRSSP16_10 are not detailed in the provided data, Vibrio species are generally known to inhabit marine environments and are often associated with various ecological interactions, including those with marine organisms and in nutrient cycling. The single replicon trait may suggest an adaptation to specific environmental conditions, allowing for efficient replication and resource utilization. Understanding the genomic characteristics of Vibrio sp. UCD-FRSSP16_10 could provide insights into its ecological niche and potential interactions within marine ecosystems. Further investigation into its metabolic capabilities and ecological roles could enhance our knowledge of its contribution to marine biodiversity and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. UCD-FRSSP16_10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. UCD-FRSSP16_10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. UCD-FRSSP16_10 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

1050788 bp

Thymine Count

1035409 bp

Guanine Count

743775 bp

Cytosine Count

763929 bp

Genome Length

3593963 bp

Protein-coding Genes

3067 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit betaA9264_12580Not AvailablePositive1377575 - 137897850598.6
f0f1 atp synthase subunit epsilonA9264_12585Not AvailablePositive1378997 - 137941915152.1
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseA9264_12590Not AvailablePositive1379665 - 138102948726.0
amino acid abc transporter permeaseA9264_12595Not AvailableNegative1381126 - 138186927876.6
cyclohexadienyl dehydrataseA9264_12600Not AvailablePositive1381959 - 138273528654.7
bcr/cfla family multidrug efflux transporterA9264_12605Not AvailableNegative1382791 - 138396941667.2
lysr family transcriptional regulatorA9264_12610Not AvailablePositive1384075 - 138498034294.3
plp-dependent threonine dehydrataseA9264_12615Not AvailableNegative1385021 - 138655355924.8
dihydroxy-acid dehydrataseA9264_12620Not AvailableNegative1386558 - 138839965618.3
branched-chain amino acid aminotransferaseA9264_12625Not AvailableNegative1388409 - 138935334427.0

Displaying genes 1251 – 1260 of 3183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.