Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | A8M77_00260 | Not Available | Positive | 46372 - 46575 | 7477.14 |
| 30s ribosomal protein s17 | A8M77_00265 | Not Available | Positive | 46585 - 46854 | 10224.5 |
| peroxiredoxin | A8M77_00270 | Not Available | Positive | 46925 - 47431 | 17685.1 |
| gcn5 family acetyltransferase | A8M77_00275 | Not Available | Negative | 47447 - 48037 | 20721.8 |
| cytochrome b | A8M77_00280 | Not Available | Negative | 48034 - 48747 | 25562.4 |
| cytochrome c | A8M77_00285 | Not Available | Positive | 48904 - 49350 | 15730.9 |
| redoxin | A8M77_00290 | Not Available | Negative | 49392 - 49889 | 17806.7 |
| hypothetical protein | A8M77_00295 | Not Available | Positive | 49996 - 50535 | 18508.4 |
| mfs transporter | A8M77_00300 | Not Available | Positive | 50532 - 51779 | 44801.9 |
| pts fructose transporter subunit iia | A8M77_00305 | Not Available | Positive | 51776 - 52231 | 16263.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
