Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpaf | A8M77_31275 | Not Available | Positive | 6583392 - 6584768 | 51014.2 |
| pilus assembly protein tadb | A8M77_31280 | Not Available | Positive | 6584782 - 6585774 | 36582.0 |
| type ii secretion system protein | A8M77_31285 | Not Available | Positive | 6585785 - 6586693 | 32783.7 |
| hypothetical protein | A8M77_31290 | Not Available | Positive | 6586777 - 6588252 | 53639.9 |
| dna-binding response regulator | A8M77_31295 | Not Available | Negative | 6588350 - 6589033 | 24765.0 |
| hypothetical protein | A8M77_31300 | Not Available | Negative | 6589051 - 6590736 | 61284.2 |
| cobalt chelatase | A8M77_31305 | Not Available | Negative | 6590896 - 6592623 | 63895.6 |
| cobaltochelatase subunit cobs | A8M77_31310 | Not Available | Negative | 6592644 - 6593618 | 36796.2 |
| iclr family transcriptional regulator | A8M77_31315 | Not Available | Negative | 6593633 - 6594451 | 29958.2 |
| sulfoacetaldehyde acetyltransferase | A8M77_31320 | Not Available | Positive | 6594633 - 6596441 | 65348.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
