Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-deoxy-d-gluconate 3-dehydrogenase | A8M77_29260 | Not Available | Negative | 6129892 - 6130650 | 26178.4 |
| abc transporter atp-binding protein | A8M77_29265 | Not Available | Negative | 6130677 - 6131726 | 37784.2 |
| atpase | A8M77_29270 | Not Available | Negative | 6131723 - 6132721 | 37545.1 |
| atpase | A8M77_29275 | Not Available | Negative | 6132702 - 6133724 | 37386.4 |
| peptidase s1 | A8M77_29280 | Not Available | Negative | 6133772 - 6134767 | 34132.9 |
| dnaase | A8M77_29285 | Not Available | Positive | 6134863 - 6135699 | 30565.7 |
| hypothetical protein | A8M77_29290 | Not Available | Positive | 6135848 - 6136264 | 14102.6 |
| mechanosensitive ion channel protein mscs | A8M77_29295 | Not Available | Negative | 6136319 - 6137155 | 30015.6 |
| dna-deoxyinosine glycosylase | A8M77_29300 | Not Available | Positive | 6137203 - 6137754 | 20042.0 |
| spermidine synthase | A8M77_29305 | Not Available | Positive | 6137751 - 6138500 | 28223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
