Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase | A8M77_29060 | Not Available | Positive | 6092438 - 6092917 | 18486.8 |
| atp-dependent acyl-coa ligase | A8M77_29065 | Not Available | Positive | 6092923 - 6094548 | 58606.7 |
| acetyl-coa acetyltransferase | A8M77_29070 | Not Available | Positive | 6094545 - 6095720 | 41845.8 |
| short-chain dehydrogenase | A8M77_29075 | Not Available | Positive | 6095717 - 6096967 | 45272.6 |
| cyclase | A8M77_29080 | Not Available | Positive | 6096973 - 6097785 | 29823.4 |
| short-chain dehydrogenase | A8M77_29085 | Not Available | Positive | 6097782 - 6098513 | 25594.2 |
| branched-chain amino acid abc transporter substrate-binding protein | A8M77_29090 | Not Available | Positive | 6098673 - 6099824 | 40504.7 |
| branched-chain amino acid abc transporter substrate-binding protein | A8M77_29095 | Not Available | Positive | 6099956 - 6101101 | 39943.1 |
| oxidoreductase | A8M77_29100 | Not Available | Positive | 6101133 - 6102449 | 49075.3 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | A8M77_29105 | Not Available | Positive | 6102446 - 6102910 | 17508.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
