Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | A8M77_28750 | Not Available | Negative | 6017684 - 6018697 | 34487.4 |
| d-xylose abc transporter atp-binding protein | A8M77_28755 | Not Available | Negative | 6018732 - 6020279 | 55356.4 |
| n-acylmannosamine kinase | A8M77_28760 | Not Available | Negative | 6020272 - 6021516 | 44816.5 |
| 3-phenylpropionic acid transporter | A8M77_28765 | Not Available | Positive | 6021880 - 6023286 | 50679.4 |
| hypothetical protein | A8M77_28770 | Not Available | Negative | 6023329 - 6023520 | 6919.39 |
| transposase | A8M77_28775 | Not Available | Negative | 6024559 - 6025482 | 34579.1 |
| transposase | A8M77_28780 | Not Available | Negative | 6025512 - 6025835 | 11989.2 |
| 23s rrna pseudouridylate synthase b | A8M77_28790 | Not Available | Negative | 6027203 - 6028711 | 54099.0 |
| pseudouridine synthase | A8M77_28800 | Not Available | Negative | 6029729 - 6030718 | 35681.0 |
| competence protein coml | A8M77_28805 | Not Available | Positive | 6030769 - 6031578 | 30660.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
