Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase | A8M77_28550 | Not Available | Positive | 5977022 - 5978677 | 61205.0 |
| abc transporter | A8M77_28555 | Not Available | Positive | 5978668 - 5979744 | 38191.2 |
| abc transporter atp-binding protein | A8M77_28560 | Not Available | Positive | 5979746 - 5980816 | 38894.1 |
| abc transporter permease | A8M77_28565 | Not Available | Positive | 5980813 - 5981703 | 32920.8 |
| sugar abc transporter permease | A8M77_28570 | Not Available | Positive | 5981700 - 5982512 | 30709.0 |
| hypothetical protein | A8M77_28575 | Not Available | Positive | 5982539 - 5982847 | 11777.0 |
| abc transporter substrate-binding protein | A8M77_28580 | Not Available | Positive | 5983093 - 5984823 | 63840.9 |
| hypothetical protein | A8M77_28585 | Not Available | Positive | 5984997 - 5985476 | 16650.7 |
| n-methyl-d-aspartate receptor nmdar2c subunit | A8M77_28590 | Not Available | Negative | 5985477 - 5986094 | 23192.5 |
| lytic murein transglycosylase b | A8M77_28595 | Not Available | Negative | 5986098 - 5987159 | 38438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
