Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | A8M77_28490 | Not Available | Negative | 5966182 - 5967387 | 42175.9 |
| shikimate dehydrogenase | A8M77_28495 | Not Available | Negative | 5967398 - 5968237 | 29695.9 |
| oxidoreductase | A8M77_28500 | Not Available | Negative | 5968234 - 5969274 | 37243.8 |
| abc transporter substrate-binding protein | A8M77_28505 | Not Available | Negative | 5969291 - 5970316 | 36800.2 |
| l-dehydroascorbate transporter large permease subunit | A8M77_28510 | Not Available | Negative | 5970361 - 5971641 | 45026.6 |
| c4-dicarboxylate abc transporter permease | A8M77_28515 | Not Available | Negative | 5971643 - 5972245 | 22299.3 |
| hypothetical protein | A8M77_28520 | Not Available | Negative | 5972242 - 5973114 | 32680.0 |
| shikimate dehydrogenase | A8M77_28525 | Not Available | Negative | 5973143 - 5974066 | 32569.2 |
| 4-hydroxyphenylpyruvate dioxygenase | A8M77_28530 | Not Available | Positive | 5974232 - 5975017 | 28889.0 |
| deor family transcriptional regulator | A8M77_28545 | Not Available | Negative | 5976153 - 5976923 | 27945.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
