Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_27930 | Not Available | Positive | 5848694 - 5849746 | 37650.7 |
| hypothetical protein | A8M77_27935 | Not Available | Positive | 5849743 - 5850441 | 24645.7 |
| type vi secretion protein | A8M77_27940 | Not Available | Positive | 5850451 - 5850846 | 13359.6 |
| hypothetical protein | A8M77_27945 | Not Available | Negative | 5850855 - 5851439 | 21624.0 |
| hypothetical protein | A8M77_27950 | Not Available | Positive | 5851521 - 5853146 | 55244.7 |
| serine/threonine protein phosphatase | A8M77_27955 | Not Available | Positive | 5853175 - 5853939 | 27162.3 |
| hcp1 family type vi secretion system effector | A8M77_27960 | Not Available | Negative | 5854074 - 5854559 | 17088.1 |
| evpb family type vi secretion protein | A8M77_27965 | Not Available | Negative | 5854676 - 5856169 | 55461.3 |
| type vi secretion system-associated protein | A8M77_27970 | Not Available | Negative | 5856204 - 5856722 | 18714.4 |
| type vi secretion protein impa | A8M77_27975 | Not Available | Negative | 5856787 - 5857827 | 36577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
