Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_27880 | Not Available | Positive | 5832924 - 5833481 | 20327.3 |
| virulence protein scie type | A8M77_27885 | Not Available | Positive | 5833492 - 5834325 | 30491.4 |
| type vi secretion system lysozyme | A8M77_27890 | Not Available | Positive | 5834318 - 5834836 | 19679.7 |
| type vi secretion system protein impg | A8M77_27895 | Not Available | Positive | 5834950 - 5836839 | 69284.4 |
| type vi secretion protein | A8M77_27900 | Not Available | Positive | 5836836 - 5837903 | 39655.4 |
| clpv1 family t6ss atpase | A8M77_27905 | Not Available | Positive | 5837943 - 5840639 | 98104.8 |
| hypothetical protein | A8M77_27910 | Not Available | Positive | 5840716 - 5841762 | 37645.3 |
| hypothetical protein | A8M77_27915 | Not Available | Positive | 5841849 - 5843168 | 47771.8 |
| type vi secretion protein vgr | A8M77_27920 | Not Available | Positive | 5843187 - 5846075 | 103485.0 |
| hypothetical protein | A8M77_27925 | Not Available | Positive | 5846091 - 5848697 | 94203.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
