Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escs/yscs/hrcs family type iii secretion system export apparatus protein | A8M77_27375 | Not Available | Positive | 5721594 - 5721863 | 9450.06 |
| flagellar biosynthetic protein flir | A8M77_27380 | Not Available | Positive | 5721908 - 5722657 | 26062.5 |
| hypothetical protein | A8M77_27385 | Not Available | Positive | 5722764 - 5723231 | 17086.2 |
| protein-l-isoaspartate o-methyltransferase | A8M77_27390 | Not Available | Positive | 5723455 - 5724093 | 22696.7 |
| spermidine synthase | A8M77_27395 | Not Available | Positive | 5724093 - 5726483 | 85263.9 |
| aldo/keto reductase | A8M77_27400 | Not Available | Positive | 5726517 - 5727452 | 33953.2 |
| hypothetical protein | A8M77_27405 | Not Available | Positive | 5727456 - 5728076 | 23039.3 |
| alpha/beta hydrolase | A8M77_27410 | Not Available | Negative | 5728067 - 5728864 | 28231.1 |
| hypothetical protein | A8M77_27415 | Not Available | Negative | 5728936 - 5729268 | 11984.3 |
| cytochrome c oxidase subunit iv | A8M77_27420 | Not Available | Negative | 5729377 - 5729691 | 11650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
