Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbf | A8M77_26885 | Not Available | Negative | 5623358 - 5624140 | 28734.4 |
| conjugal transfer protein trbe | A8M77_26890 | Not Available | Negative | 5624137 - 5626695 | 93985.5 |
| conjugal transfer protein trbd | A8M77_26895 | Not Available | Negative | 5626692 - 5627003 | 11802.6 |
| conjugal transfer protein trbc | A8M77_26900 | Not Available | Negative | 5627007 - 5627471 | 16354.2 |
| p-type conjugative transfer atpase trbb | A8M77_26905 | Not Available | Negative | 5627488 - 5628450 | 35046.8 |
| transcriptional regulator | A8M77_26910 | Not Available | Negative | 5628760 - 5629122 | 13343.2 |
| single-stranded dna-binding protein | A8M77_26915 | Not Available | Positive | 5629236 - 5629577 | 12655.8 |
| transcriptional regulator | A8M77_26920 | Not Available | Positive | 5629624 - 5630844 | 45768.4 |
| mercuric transport protein | A8M77_26925 | Not Available | Positive | 5631149 - 5631454 | 11012.0 |
| mercuric transport protein periplasmic component | A8M77_26930 | Not Available | Positive | 5631467 - 5631742 | 9490.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
