Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | A8M77_25905 | Not Available | Positive | 5415030 - 5415365 | 11800.8 |
| protein-export membrane protein secd | A8M77_25910 | Not Available | Positive | 5415419 - 5417299 | 67648.4 |
| protein-export membrane protein secf | A8M77_25915 | Not Available | Positive | 5417315 - 5418265 | 35084.9 |
| hypothetical protein | A8M77_25920 | Not Available | Positive | 5418397 - 5420781 | 85756.0 |
| protein smg | A8M77_25925 | Not Available | Negative | 5420788 - 5421294 | 18476.8 |
| dna protecting protein dpra | A8M77_25930 | Not Available | Negative | 5421357 - 5422490 | 39028.2 |
| peptidoglycan-binding protein | A8M77_25935 | Not Available | Negative | 5422508 - 5423722 | 44145.3 |
| peptide deformylase | A8M77_25940 | Not Available | Positive | 5423885 - 5424418 | 19961.1 |
| hypothetical protein | A8M77_25945 | Not Available | Positive | 5424415 - 5424924 | 18639.1 |
| methionyl-trna formyltransferase | A8M77_25950 | Not Available | Positive | 5424932 - 5425882 | 33292.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
