Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginyl/glutamyl-trna amidotransferase subunit c | A8M77_00060 | Not Available | Negative | 11247 - 11546 | 10847.0 |
| rod shape-determining protein | A8M77_00065 | Not Available | Positive | 11784 - 12827 | 36821.9 |
| rod shape-determining protein mrec | A8M77_00070 | Not Available | Positive | 12908 - 13915 | 35366.4 |
| rod shape-determining protein mred | A8M77_00075 | Not Available | Positive | 13912 - 14433 | 19163.3 |
| penicillin-binding protein 2 | A8M77_00080 | Not Available | Positive | 14500 - 16464 | 71491.6 |
| choline dehydrogenase | A8M77_00085 | Not Available | Negative | 16726 - 18357 | 59649.6 |
| abc transporter permease | A8M77_00090 | Not Available | Positive | 18554 - 19720 | 42202.9 |
| abc transporter atp-binding protein | A8M77_00095 | Not Available | Positive | 19792 - 20640 | 30112.7 |
| mammalian cell entry protein | A8M77_00100 | Not Available | Positive | 20646 - 21623 | 34302.7 |
| hypothetical protein | A8M77_00105 | Not Available | Positive | 21635 - 22309 | 23736.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
