Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | A8M77_25150 | Not Available | Negative | 5256534 - 5256941 | 14604.6 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | A8M77_25155 | Not Available | Negative | 5256954 - 5257832 | 32591.7 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | A8M77_25160 | Not Available | Negative | 5257835 - 5259292 | 52171.5 |
| abc transporter substrate-binding protein | A8M77_25165 | Not Available | Negative | 5259301 - 5260278 | 34591.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | A8M77_25170 | Not Available | Negative | 5260320 - 5261072 | 27742.2 |
| fumarylacetoacetate hydrolase | A8M77_25175 | Not Available | Negative | 5261069 - 5261692 | 21880.4 |
| homoprotocatechuate degradation operon regulator, hpar | A8M77_25180 | Not Available | Negative | 5261689 - 5262120 | 16351.0 |
| glutathione s-transferase | A8M77_25185 | Not Available | Negative | 5262371 - 5262976 | 22544.9 |
| fumarate reductase | A8M77_25190 | Not Available | Negative | 5262973 - 5264697 | 62009.1 |
| short-chain dehydrogenase | A8M77_25195 | Not Available | Negative | 5264694 - 5265428 | 25811.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
