Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | A8M77_24890 | Not Available | Negative | 5201020 - 5202003 | 34703.1 |
| acyl-coa synthetase | A8M77_24895 | Not Available | Negative | 5202042 - 5203982 | 67834.5 |
| pimeloyl-coa dehydrogenase small subunit | A8M77_24900 | Not Available | Negative | 5204058 - 5205209 | 40542.3 |
| pimeloyl-coa dehydrogenase large subunit | A8M77_24905 | Not Available | Negative | 5205223 - 5206431 | 44412.2 |
| acetyl-coa acetyltransferase | A8M77_24910 | Not Available | Negative | 5206443 - 5207633 | 41836.3 |
| 3-hydroxyacyl-coa dehydrogenase | A8M77_24915 | Not Available | Negative | 5207655 - 5209790 | 75519.3 |
| lysr family transcriptional regulator | A8M77_24920 | Not Available | Positive | 5209934 - 5210854 | 34277.5 |
| hypothetical protein | A8M77_24925 | Not Available | Negative | 5210855 - 5211214 | 13450.8 |
| lysr family transcriptional regulator | A8M77_24930 | Not Available | Negative | 5211536 - 5212447 | 33923.1 |
| short-chain dehydrogenase | A8M77_24935 | Not Available | Positive | 5212549 - 5213433 | 31206.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
