Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter dcta | A8M77_24440 | Not Available | Negative | 5091560 - 5092894 | 46424.4 |
| acyl-coa dehydrogenase | A8M77_24445 | Not Available | Positive | 5093224 - 5094084 | 32311.6 |
| coa-transferase | A8M77_24450 | Not Available | Positive | 5094122 - 5095312 | 42654.0 |
| host specificity protein | A8M77_24455 | Not Available | Positive | 5095323 - 5096150 | 28516.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | A8M77_24460 | Not Available | Positive | 5096189 - 5097535 | 49287.8 |
| lysr family transcriptional regulator | A8M77_24465 | Not Available | Negative | 5097541 - 5098470 | 34067.4 |
| abc transporter substrate-binding protein | A8M77_24470 | Not Available | Positive | 5098621 - 5099592 | 33757.0 |
| methylitaconate delta2-delta3-isomerase | A8M77_24475 | Not Available | Positive | 5099594 - 5101618 | 71517.8 |
| porin | A8M77_24480 | Not Available | Positive | 5101740 - 5103032 | 44464.6 |
| hypothetical protein | A8M77_24485 | Not Available | Negative | 5103258 - 5104544 | 47889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
