Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | A8M77_24280 | Not Available | Positive | 5049357 - 5050340 | 36665.7 |
| 5-formyltetrahydrofolate cyclo-ligase | A8M77_24285 | Not Available | Negative | 5050344 - 5050961 | 23049.7 |
| lytic transglycosylase | A8M77_24290 | Not Available | Positive | 5050971 - 5052992 | 74178.3 |
| methyltransferase | A8M77_24295 | Not Available | Positive | 5052992 - 5053549 | 19493.0 |
| glutathione s-transferase | A8M77_24300 | Not Available | Positive | 5053639 - 5054322 | 25706.1 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | A8M77_24305 | Not Available | Positive | 5054350 - 5055603 | 46369.0 |
| histidine kinase | A8M77_24310 | Not Available | Positive | 5057072 - 5058349 | 47685.3 |
| hypothetical protein | A8M77_24315 | Not Available | Positive | 5058346 - 5059368 | 39389.3 |
| trehalose-phosphatase | A8M77_24320 | Not Available | Positive | 5059488 - 5060249 | 27199.8 |
| glucoamylase | A8M77_24325 | Not Available | Positive | 5060369 - 5062189 | 67887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
