Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartrate dehydrogenase | A8M77_23865 | Not Available | Positive | 4958356 - 4959444 | 39588.4 |
| dna-binding protein hu | A8M77_23870 | Not Available | Positive | 4959682 - 4959954 | 9458.64 |
| Trna-val | Not Available | Not Available | Positive | 4959971 - 4960046 | Not Available |
| peptidylprolyl isomerase | A8M77_23880 | Not Available | Positive | 4960108 - 4962036 | 70339.5 |
| Trna-his | Not Available | Not Available | Positive | 4962066 - 4962141 | Not Available |
| histidine biosynthesis protein hisie | A8M77_23890 | Not Available | Positive | 4962263 - 4962604 | 12454.9 |
| nadph:quinone oxidoreductase | A8M77_23895 | Not Available | Negative | 4962669 - 4963655 | 34290.8 |
| 5'/3'-nucleotidase sure | A8M77_23900 | Not Available | Positive | 4963780 - 4964544 | 27462.7 |
| protein-l-isoaspartate o-methyltransferase | A8M77_23905 | Not Available | Positive | 4964547 - 4965323 | 26986.0 |
| peptidase | A8M77_23910 | Not Available | Positive | 4965335 - 4966258 | 31461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
