Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | A8M77_21980 | Not Available | Positive | 4566007 - 4566837 | 29212.2 |
| serine hydroxymethyltransferase | A8M77_21985 | Not Available | Positive | 4567049 - 4568296 | 44971.0 |
| transcriptional regulator nrdr | A8M77_21990 | Not Available | Positive | 4568327 - 4568770 | 17264.0 |
| hypothetical protein | A8M77_21995 | Not Available | Positive | 4569093 - 4569659 | 20168.2 |
| riboflavin biosynthesis protein ribd | A8M77_22000 | Not Available | Positive | 4569656 - 4570792 | 40121.1 |
| riboflavin synthase subunit alpha | A8M77_22005 | Not Available | Positive | 4570838 - 4571491 | 22339.6 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | A8M77_22010 | Not Available | Positive | 4571488 - 4572648 | 41082.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | A8M77_22015 | Not Available | Positive | 4572645 - 4573115 | 16489.7 |
| n utilization substance protein b | A8M77_22020 | Not Available | Positive | 4573126 - 4573659 | 19427.0 |
| aminotransferase | A8M77_22025 | Not Available | Positive | 4573742 - 4574941 | 43636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
