Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly transcriptional regulator iscr | A8M77_20835 | Not Available | Positive | 4341942 - 4342478 | 19308.4 |
| cysteine desulfurase iscs | A8M77_20840 | Not Available | Positive | 4342551 - 4343771 | 44947.1 |
| fe-s cluster assembly scaffold iscu | A8M77_20845 | Not Available | Positive | 4343796 - 4344209 | 14447.2 |
| iron-sulfur cluster assembly protein isca | A8M77_20850 | Not Available | Positive | 4344211 - 4344534 | 11785.1 |
| fe-s protein assembly co-chaperone hscb | A8M77_20855 | Not Available | Positive | 4344604 - 4345122 | 19607.0 |
| fe-s protein assembly chaperone hsca | A8M77_20860 | Not Available | Positive | 4345127 - 4346983 | 64764.0 |
| ferredoxin, 2fe-2s type, isc system | A8M77_20865 | Not Available | Positive | 4346991 - 4347329 | 12374.6 |
| dna polymerase iii subunit epsilon | A8M77_20870 | Not Available | Positive | 4347419 - 4348138 | 26476.5 |
| Trna-val | Not Available | Not Available | Positive | 4348201 - 4348275 | Not Available |
| integrase | A8M77_20880 | Not Available | Negative | 4348338 - 4349279 | 34973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
