Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | A8M77_20520 | Not Available | Negative | 4278304 - 4279005 | 25129.1 |
| maleylacetoacetate isomerase | A8M77_20525 | Not Available | Positive | 4279109 - 4279747 | 24059.8 |
| laccase | A8M77_20530 | Not Available | Positive | 4279750 - 4280505 | 26256.2 |
| hypothetical protein | A8M77_20535 | Not Available | Negative | 4280437 - 4280733 | 10122.4 |
| class i poly(r)-hydroxyalkanoic acid synthase | A8M77_20540 | Not Available | Positive | 4280838 - 4282562 | 63418.5 |
| acetyl-coa acetyltransferase | A8M77_20545 | Not Available | Positive | 4282609 - 4283787 | 40376.9 |
| hypothetical protein | A8M77_20550 | Not Available | Positive | 4283944 - 4284390 | 15289.8 |
| lysr family transcriptional regulator | A8M77_20555 | Not Available | Negative | 4284339 - 4285271 | 33890.2 |
| laci family transcriptional regulator | A8M77_20560 | Not Available | Positive | 4285407 - 4286384 | 33678.0 |
| acyl-coa dehydrogenase | A8M77_20565 | Not Available | Positive | 4286391 - 4287287 | 32973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
