Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | A8M77_20420 | Not Available | Negative | 4255214 - 4256047 | 29933.4 |
| gntr family transcriptional regulator | A8M77_20425 | Not Available | Positive | 4256118 - 4256915 | 28644.1 |
| abc transporter substrate-binding protein | A8M77_20430 | Not Available | Positive | 4257077 - 4258051 | 34128.5 |
| 5-dehydro-4-deoxyglucarate dehydratase | A8M77_20435 | Not Available | Positive | 4258092 - 4259003 | 32667.3 |
| aldehyde dehydrogenase | A8M77_20440 | Not Available | Positive | 4259097 - 4260533 | 50696.5 |
| alpha-amylase | A8M77_20445 | Not Available | Negative | 4260518 - 4262155 | 60303.1 |
| beta-glucosidase | A8M77_20450 | Not Available | Negative | 4262166 - 4264313 | 76094.9 |
| beta-glucosidase | A8M77_20455 | Not Available | Positive | 4264439 - 4265734 | 48287.9 |
| glucan 1,4-alpha-glucosidase | A8M77_20460 | Not Available | Positive | 4265731 - 4267104 | 50143.9 |
| glycosyl transferase family 1 | A8M77_20465 | Not Available | Positive | 4267104 - 4268864 | 64217.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
