Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | A8M77_17605 | Not Available | Negative | 3658165 - 3659091 | 32618.2 |
| 30s ribosomal protein s2 | A8M77_17610 | Not Available | Negative | 3659204 - 3659959 | 27631.4 |
| amidase | A8M77_17615 | Not Available | Positive | 3660141 - 3661472 | 46244.6 |
| amino acid dehydrogenase | A8M77_17620 | Not Available | Positive | 3661529 - 3662785 | 45236.8 |
| nad(p)h-hydrate dehydratase | A8M77_17625 | Not Available | Positive | 3662823 - 3664277 | 49287.4 |
| 3-oxoacyl-acp reductase | A8M77_17630 | Not Available | Negative | 3664285 - 3665046 | 26550.0 |
| ribonuclease r | A8M77_17635 | Not Available | Negative | 3665060 - 3667384 | 86270.9 |
| Trna-leu | Not Available | Not Available | Positive | 3667403 - 3667487 | Not Available |
| ribosomal protein s12 methylthiotransferase | A8M77_17645 | Not Available | Negative | 3667569 - 3668978 | 50756.2 |
| polyhydroxyalkanoate synthesis repressor phar | A8M77_17650 | Not Available | Negative | 3668997 - 3669617 | 23399.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
