Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase | A8M77_17240 | Not Available | Negative | 3585083 - 3585853 | 27298.9 |
| rrna methyltransferase | A8M77_17245 | Not Available | Negative | 3585889 - 3586653 | 27794.5 |
| inositol monophosphatase | A8M77_17250 | Not Available | Positive | 3586776 - 3587795 | 36360.3 |
| hypothetical protein | A8M77_17255 | Not Available | Positive | 3587795 - 3590041 | 80245.3 |
| mechanosensitive ion channel protein mscs | A8M77_17260 | Not Available | Positive | 3590041 - 3591126 | 39549.0 |
| pca operon transcription factor pcaq | A8M77_17265 | Not Available | Negative | 3591134 - 3592054 | 32748.4 |
| tctc | A8M77_17270 | Not Available | Positive | 3592188 - 3593174 | 33940.5 |
| hypothetical protein | A8M77_17280 | Not Available | Positive | 3593619 - 3594602 | 35079.4 |
| abc transporter substrate-binding protein | A8M77_17285 | Not Available | Positive | 3594620 - 3595585 | 34150.8 |
| twin-arginine translocation pathway signal protein | A8M77_17290 | Not Available | Positive | 3595591 - 3596907 | 49048.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
