Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l6 | A8M77_01515 | Not Available | Positive | 303102 - 303635 | 18924.2 |
| 50s ribosomal protein l18 | A8M77_01520 | Not Available | Positive | 303650 - 304015 | 12796.5 |
| 30s ribosomal protein s5 | A8M77_01525 | Not Available | Positive | 304034 - 304552 | 18093.1 |
| 50s ribosomal protein l30 | A8M77_01530 | Not Available | Positive | 304567 - 304749 | 6660.35 |
| 50s ribosomal protein l15 | A8M77_01535 | Not Available | Positive | 304761 - 305192 | 14621.1 |
| preprotein translocase subunit secy | A8M77_01540 | Not Available | Positive | 305215 - 306525 | 47634.5 |
| translation initiation factor if-1 | A8M77_01545 | Not Available | Positive | 306540 - 306758 | 8248.23 |
| 30s ribosomal protein s13 | A8M77_01550 | Not Available | Positive | 306933 - 307298 | 13773.0 |
| 30s ribosomal protein s11 | A8M77_01555 | Not Available | Positive | 307311 - 307715 | 14144.9 |
| 30s ribosomal protein s4 | A8M77_01560 | Not Available | Positive | 307852 - 308475 | 23536.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
