Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilt | A8M77_16885 | Not Available | Positive | 3507394 - 3507828 | 15372.5 |
| lysr family transcriptional regulator | A8M77_16890 | Not Available | Negative | 3508772 - 3509698 | 33407.5 |
| hydroxymethylglutaryl-coa lyase | A8M77_16895 | Not Available | Positive | 3509833 - 3510765 | 32514.1 |
| formyl-coa transferase | A8M77_16900 | Not Available | Positive | 3510780 - 3511934 | 41761.0 |
| abc transporter substrate-binding protein | A8M77_16905 | Not Available | Positive | 3511977 - 3512951 | 33520.7 |
| 4-hydroxyphenylpyruvate dioxygenase | A8M77_16910 | Not Available | Positive | 3512977 - 3514053 | 40030.7 |
| nitric oxide synthase | A8M77_16920 | Not Available | Positive | 3516201 - 3518624 | 88125.6 |
| hypothetical protein | A8M77_16925 | Not Available | Positive | 3518725 - 3519834 | 40214.6 |
| gluconolactonase | A8M77_16930 | Not Available | Negative | 3519850 - 3520788 | 34643.5 |
| abc transporter permease | A8M77_16935 | Not Available | Negative | 3520791 - 3521771 | 34568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
