Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | A8M77_16630 | Not Available | Positive | 3457296 - 3459488 | 78966.3 |
| arylmalonate decarboxylase | A8M77_16635 | Not Available | Positive | 3459556 - 3460302 | 26030.6 |
| hypothetical protein | A8M77_16640 | Not Available | Positive | 3460286 - 3461176 | 31263.3 |
| mandelate racemase | A8M77_16645 | Not Available | Positive | 3461294 - 3462448 | 41841.1 |
| abc transporter substrate-binding protein | A8M77_16650 | Not Available | Positive | 3462481 - 3463455 | 33063.5 |
| alpha-hydroxy-acid oxidizing enzyme | A8M77_16655 | Not Available | Positive | 3463461 - 3464609 | 42215.2 |
| duf2970 domain-containing protein | A8M77_16660 | Not Available | Negative | 3464614 - 3464802 | 6302.94 |
| alcohol dehydrogenase | A8M77_16665 | Not Available | Negative | 3464839 - 3466122 | 45792.2 |
| cytochrome c | A8M77_16670 | Not Available | Negative | 3466119 - 3466820 | 25114.4 |
| gntr family transcriptional regulator | A8M77_16675 | Not Available | Negative | 3466908 - 3468386 | 53871.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
