Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monothiol glutaredoxin, grx4 family | A8M77_16530 | Not Available | Positive | 3443512 - 3443832 | 11792.4 |
| mannose-6-phosphate isomerase | A8M77_16535 | Not Available | Positive | 3443833 - 3444333 | 18018.1 |
| aaa family atpase | A8M77_16540 | Not Available | Positive | 3444431 - 3445438 | 36901.1 |
| hypothetical protein | A8M77_16545 | Not Available | Positive | 3445492 - 3446808 | 48771.2 |
| lytic transglycosylase | A8M77_16550 | Not Available | Negative | 3446805 - 3447443 | 23687.6 |
| proline--trna ligase | A8M77_16555 | Not Available | Negative | 3447440 - 3449185 | 63867.0 |
| rna pyrophosphohydrolase | A8M77_16560 | Not Available | Positive | 3449311 - 3449970 | 26050.6 |
| hypothetical protein | A8M77_16565 | Not Available | Positive | 3449957 - 3450511 | 20050.9 |
| glutamate 5-kinase | A8M77_16570 | Not Available | Negative | 3450540 - 3451688 | 40574.9 |
| gtpase obge | A8M77_16575 | Not Available | Negative | 3451778 - 3452830 | 37951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
