Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein | A8M77_16480 | Not Available | Positive | 3432234 - 3433544 | 47459.2 |
| glycerol-3-phosphate transporter permease | A8M77_16485 | Not Available | Positive | 3433714 - 3434595 | 32508.2 |
| glycerol-3-phosphate transporter | A8M77_16490 | Not Available | Positive | 3434641 - 3435489 | 31157.4 |
| glycerol-3-phosphate transporter atp-binding subunit | A8M77_16495 | Not Available | Positive | 3435508 - 3436515 | 36774.8 |
| glycerophosphodiester phosphodiesterase | A8M77_16500 | Not Available | Positive | 3436512 - 3437252 | 26693.8 |
| mechanosensitive ion channel protein mscs | A8M77_16505 | Not Available | Positive | 3437411 - 3439822 | 85585.3 |
| hypothetical protein | A8M77_16510 | Not Available | Negative | 3439843 - 3440121 | 10186.9 |
| glutamyl-trna reductase | A8M77_16515 | Not Available | Positive | 3440199 - 3441470 | 46147.7 |
| peptide chain release factor 1 | A8M77_16520 | Not Available | Positive | 3441541 - 3442629 | 40446.9 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | A8M77_16525 | Not Available | Positive | 3442626 - 3443483 | 29971.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
