Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | A8M77_15570 | Not Available | Negative | 3257385 - 3258158 | 28698.1 |
| molecular chaperone sura | A8M77_15575 | Not Available | Negative | 3258190 - 3259599 | 51016.5 |
| lps biosynthesis protein | A8M77_15580 | Not Available | Negative | 3259611 - 3262091 | 92804.8 |
| aminoglycoside phosphotransferase | A8M77_15585 | Not Available | Positive | 3262184 - 3263278 | 40812.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | A8M77_15590 | Not Available | Positive | 3263275 - 3264009 | 26013.4 |
| peptidase m20 | A8M77_15595 | Not Available | Positive | 3264056 - 3265417 | 47387.3 |
| hypothetical protein | A8M77_15600 | Not Available | Positive | 3265459 - 3265914 | 14705.8 |
| mfs transporter | A8M77_15605 | Not Available | Positive | 3265924 - 3267096 | 41103.3 |
| alpha/beta hydrolase | A8M77_15610 | Not Available | Negative | 3267093 - 3267941 | 30222.4 |
| peptidase m20 | A8M77_15615 | Not Available | Negative | 3267938 - 3269431 | 53548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
