Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_14910 | Not Available | Negative | 3134166 - 3135182 | 38064.9 |
| acyl-coa thioesterase | A8M77_14915 | Not Available | Negative | 3135327 - 3135749 | 15318.6 |
| metal abc transporter permease | A8M77_14920 | Not Available | Positive | 3135789 - 3137621 | 67619.1 |
| hydroxyacid dehydrogenase | A8M77_14925 | Not Available | Positive | 3137645 - 3138583 | 32907.6 |
| lysr family transcriptional regulator | A8M77_14930 | Not Available | Positive | 3138643 - 3139626 | 35632.8 |
| abc transporter substrate-binding protein | A8M77_14935 | Not Available | Positive | 3139984 - 3140886 | 32186.8 |
| glutamate abc transporter permease | A8M77_14940 | Not Available | Positive | 3140985 - 3141710 | 26765.1 |
| amino acid abc transporter permease | A8M77_14945 | Not Available | Positive | 3141712 - 3142383 | 24939.5 |
| amino acid abc transporter atp-binding protein | A8M77_14950 | Not Available | Positive | 3142414 - 3143151 | 27083.2 |
| c4-dicarboxylate abc transporter | A8M77_14955 | Not Available | Negative | 3143212 - 3144246 | 37511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
