Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | A8M77_14060 | Not Available | Negative | 2978030 - 2978932 | 31639.1 |
| amino acid deaminase | A8M77_14065 | Not Available | Negative | 2978941 - 2980236 | 46807.2 |
| peptide abc transporter atp-binding protein | A8M77_14070 | Not Available | Negative | 2980233 - 2981204 | 35320.9 |
| dipeptide abc transporter atp-binding protein dppd | A8M77_14075 | Not Available | Negative | 2981221 - 2982252 | 37194.5 |
| peptide abc transporter permease | A8M77_14080 | Not Available | Negative | 2982573 - 2983412 | 30133.1 |
| peptide abc transporter | A8M77_14085 | Not Available | Negative | 2983417 - 2984358 | 33335.8 |
| peptide abc transporter | A8M77_14090 | Not Available | Negative | 2984379 - 2985968 | 57703.4 |
| hypothetical protein | A8M77_14095 | Not Available | Positive | 2986154 - 2986546 | 14096.9 |
| peptidase m23 | A8M77_14100 | Not Available | Positive | 2986543 - 2987436 | 32099.7 |
| amino acid dehydrogenase | A8M77_14105 | Not Available | Negative | 2987541 - 2988776 | 44805.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
