Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | A8M77_13995 | Not Available | Negative | 2961881 - 2962975 | 38825.3 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | A8M77_14000 | Not Available | Positive | 2963286 - 2965337 | 73342.1 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | A8M77_14005 | Not Available | Positive | 2965394 - 2965660 | 9521.99 |
| forkhead-associated protein | A8M77_14015 | Not Available | Positive | 2967456 - 2968601 | 40514.5 |
| hypothetical protein | A8M77_14020 | Not Available | Positive | 2968747 - 2968953 | 6613.54 |
| hypothetical protein | A8M77_14025 | Not Available | Positive | 2969024 - 2969425 | 13959.8 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | A8M77_14030 | Not Available | Positive | 2969433 - 2970212 | 28116.2 |
| type iii secretion system protein | A8M77_14035 | Not Available | Positive | 2970502 - 2971194 | 25963.8 |
| type iii secretion protein | A8M77_14040 | Not Available | Positive | 2971176 - 2971814 | 22951.6 |
| flagellum-specific atp synthase flil | A8M77_14045 | Not Available | Positive | 2971811 - 2973139 | 46576.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
