Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin abc transporter atp-binding protein | A8M77_13795 | Not Available | Positive | 2920742 - 2922358 | 57736.2 |
| mfs transporter | A8M77_13800 | Not Available | Positive | 2922383 - 2923585 | 41535.4 |
| ribosome maturation factor rimp | A8M77_13805 | Not Available | Positive | 2923737 - 2924348 | 22070.2 |
| transcription termination/antitermination protein nusa | A8M77_13810 | Not Available | Positive | 2924366 - 2925850 | 55035.6 |
| translation initiation factor if-2 | A8M77_13815 | Not Available | Positive | 2925875 - 2928811 | 104668.0 |
| ribosome-binding factor a | A8M77_13820 | Not Available | Positive | 2928833 - 2929204 | 13783.6 |
| trna pseudouridine(55) synthase trub | A8M77_13825 | Not Available | Positive | 2929207 - 2930151 | 33631.6 |
| gtp-binding protein typa | A8M77_13830 | Not Available | Positive | 2930148 - 2931983 | 67381.0 |
| permease | A8M77_13835 | Not Available | Positive | 2931946 - 2932887 | 33174.6 |
| hypothetical protein | A8M77_13840 | Not Available | Positive | 2932964 - 2933392 | 15986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
