Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l3 n(5)-glutamine methyltransferase | A8M77_13645 | Not Available | Negative | 2888671 - 2889534 | 30945.9 |
| succinyl-diaminopimelate desuccinylase | A8M77_13650 | Not Available | Negative | 2889531 - 2890712 | 41848.7 |
| type iv pili twitching motility protein pilt | A8M77_13655 | Not Available | Negative | 2890724 - 2891872 | 42086.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A8M77_13660 | Not Available | Negative | 2891926 - 2892750 | 29370.1 |
| succinyldiaminopimelate transaminase | A8M77_13665 | Not Available | Negative | 2892763 - 2893968 | 43564.8 |
| amino-acid n-acetyltransferase | A8M77_13670 | Not Available | Negative | 2894044 - 2895393 | 49428.5 |
| hypothetical protein | A8M77_13675 | Not Available | Negative | 2895400 - 2895807 | 14781.9 |
| hypothetical protein | A8M77_13680 | Not Available | Negative | 2895812 - 2896126 | 11860.8 |
| atp-dependent rna helicase hrpa | A8M77_13685 | Not Available | Positive | 2896199 - 2900056 | 143827.0 |
| methionine aminotransferase | A8M77_13690 | Not Available | Negative | 2900392 - 2901561 | 42534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
