Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | A8M77_13545 | Not Available | Positive | 2872919 - 2873833 | 34373.9 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | A8M77_13550 | Not Available | Positive | 2873824 - 2874432 | 21594.0 |
| ribosome silencing factor | A8M77_13555 | Not Available | Positive | 2874432 - 2875082 | 22932.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | A8M77_13560 | Not Available | Positive | 2875079 - 2875546 | 17263.8 |
| septum formation protein maf | A8M77_13565 | Not Available | Positive | 2875543 - 2876148 | 21619.3 |
| ribonuclease | A8M77_13570 | Not Available | Positive | 2876164 - 2877687 | 55962.5 |
| lipid a export permease/atp-binding protein msba | A8M77_13575 | Not Available | Negative | 2877707 - 2879491 | 64403.2 |
| tol-pal system beta propeller repeat protein tolb | A8M77_13580 | Not Available | Positive | 2879696 - 2880952 | 44445.2 |
| peptidoglycan-associated lipoprotein | A8M77_13585 | Not Available | Positive | 2880976 - 2881491 | 18344.7 |
| tol-pal system protein ybgf | A8M77_13590 | Not Available | Positive | 2881488 - 2882243 | 28270.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
