Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase (arge) | A8M77_13285 | Not Available | Positive | 2818544 - 2819755 | 44115.4 |
| hypothetical protein | A8M77_13290 | Not Available | Positive | 2819752 - 2820972 | 44196.5 |
| nodulation protein nodj | A8M77_13295 | Not Available | Negative | 2821006 - 2821833 | 30636.2 |
| nodulation factor abc transporter atp-binding protein nodi | A8M77_13300 | Not Available | Negative | 2821834 - 2822814 | 35674.1 |
| lysr family transcriptional regulator | A8M77_13305 | Not Available | Negative | 2822811 - 2823695 | 32579.6 |
| glutathione s-transferase | A8M77_13310 | Not Available | Positive | 2823814 - 2824458 | 23350.3 |
| pyridoxamine 5'-phosphate oxidase | A8M77_13315 | Not Available | Positive | 2824455 - 2825411 | 34148.6 |
| cytochrome | A8M77_13320 | Not Available | Negative | 2825417 - 2826571 | 40152.4 |
| transcriptional regulator | A8M77_13325 | Not Available | Positive | 2826623 - 2827315 | 24541.6 |
| amp nucleosidase | A8M77_13330 | Not Available | Negative | 2827453 - 2828970 | 56623.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
