Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalocrotonate decarboxylase | A8M77_12680 | Not Available | Positive | 2681350 - 2682117 | 27246.6 |
| acetaldehyde dehydrogenase (acetylating) | A8M77_12685 | Not Available | Positive | 2682162 - 2683121 | 33632.9 |
| 3-isopropylmalate dehydratase | A8M77_12690 | Not Available | Negative | 2683387 - 2684652 | 44631.7 |
| mfs transporter | A8M77_12695 | Not Available | Negative | 2684649 - 2685605 | 32588.6 |
| abc transporter atp-binding protein | A8M77_12700 | Not Available | Negative | 2685642 - 2686352 | 25702.3 |
| abc transporter atp-binding protein | A8M77_12705 | Not Available | Negative | 2686409 - 2687164 | 26834.9 |
| abc transporter permease | A8M77_12710 | Not Available | Negative | 2687157 - 2688134 | 34001.3 |
| branched-chain amino acid abc transporter permease | A8M77_12715 | Not Available | Negative | 2688131 - 2689003 | 30333.3 |
| abc transporter substrate-binding protein | A8M77_12720 | Not Available | Negative | 2689025 - 2690230 | 43420.5 |
| gntr family transcriptional regulator | A8M77_12725 | Not Available | Negative | 2690249 - 2691031 | 28782.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
