Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | A8M77_12630 | Not Available | Negative | 2672421 - 2673368 | 33758.4 |
| abc transporter permease | A8M77_12635 | Not Available | Negative | 2673373 - 2674287 | 31631.2 |
| hypothetical protein | A8M77_12640 | Not Available | Negative | 2674284 - 2674862 | 19973.0 |
| abc transporter substrate-binding protein | A8M77_12645 | Not Available | Negative | 2674882 - 2676054 | 42295.6 |
| duf4863 domain-containing protein | A8M77_12650 | Not Available | Negative | 2676162 - 2676629 | 17172.3 |
| 2-hydroxymuconic semialdehyde dehydrogenase | A8M77_12655 | Not Available | Positive | 2676967 - 2678436 | 52716.8 |
| 2-aminomuconate deaminase | A8M77_12660 | Not Available | Positive | 2678446 - 2678883 | 15778.7 |
| 3-hydroxyanthranilate 3,4-dioxygenase | A8M77_12665 | Not Available | Positive | 2678907 - 2679476 | 21683.6 |
| aminocarboxymuconate-semialdehyde decarboxylase | A8M77_12670 | Not Available | Positive | 2679497 - 2680522 | 37995.6 |
| 2-keto-4-pentenoate hydratase | A8M77_12675 | Not Available | Positive | 2680547 - 2681353 | 28521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
