Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | A8M77_01060 | Not Available | Negative | 209927 - 210859 | 32392.9 |
| yran family protein | A8M77_01065 | Not Available | Positive | 210883 - 211248 | 13125.8 |
| phosphoheptose isomerase | A8M77_01070 | Not Available | Positive | 211348 - 211977 | 21402.5 |
| transporter | A8M77_01075 | Not Available | Positive | 211974 - 212720 | 25672.8 |
| oxidoreductase | A8M77_01080 | Not Available | Negative | 212725 - 213645 | 32146.4 |
| abc transporter substrate-binding protein | A8M77_01085 | Not Available | Negative | 213683 - 214672 | 33907.6 |
| amidase | A8M77_01090 | Not Available | Negative | 214707 - 216173 | 52428.8 |
| lysr family transcriptional regulator | A8M77_01095 | Not Available | Positive | 216291 - 217202 | 33534.9 |
| type iv pili twitching motility protein pilt | A8M77_01100 | Not Available | Negative | 217212 - 218348 | 41986.7 |
| twitching motility protein pilt | A8M77_01105 | Not Available | Negative | 218489 - 219532 | 38292.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
