Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | A8M77_12275 | Not Available | Negative | 2606835 - 2607581 | 25870.2 |
| dna-binding protein | A8M77_12280 | Not Available | Positive | 2607667 - 2609103 | 51894.1 |
| hypothetical protein | A8M77_12285 | Not Available | Positive | 2609113 - 2609571 | 16257.9 |
| coa-transferase | A8M77_12290 | Not Available | Negative | 2609609 - 2610841 | 43901.6 |
| acyl-coa dehydrogenase | A8M77_12295 | Not Available | Negative | 2610843 - 2612039 | 43173.9 |
| lysr family transcriptional regulator | A8M77_12300 | Not Available | Positive | 2612218 - 2613123 | 32941.8 |
| fmdb family transcriptional regulator | A8M77_12305 | Not Available | Positive | 2613229 - 2613393 | 6213.36 |
| peroxidase | A8M77_12310 | Not Available | Positive | 2613554 - 2614213 | 24445.2 |
| mbl fold metallo-hydrolase | A8M77_12315 | Not Available | Positive | 2614230 - 2615270 | 38046.0 |
| phytanoyl-coa dioxygenase | A8M77_12320 | Not Available | Positive | 2615275 - 2616090 | 30395.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
