Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization protein hutd | A8M77_12075 | Not Available | Negative | 2561496 - 2562083 | 20748.7 |
| laci family transcriptional regulator | A8M77_12080 | Not Available | Negative | 2562083 - 2563054 | 33450.1 |
| phosphate abc transporter substrate-binding protein | A8M77_12085 | Not Available | Negative | 2563054 - 2563863 | 29358.1 |
| ornithine cyclodeaminase | A8M77_12090 | Not Available | Negative | 2563874 - 2564875 | 36901.7 |
| urocanate hydratase | A8M77_12095 | Not Available | Negative | 2564890 - 2566608 | 62559.6 |
| histidine ammonia-lyase | A8M77_12100 | Not Available | Negative | 2566645 - 2568195 | 53145.3 |
| histidine utilization repressor | A8M77_12105 | Not Available | Negative | 2568256 - 2568984 | 27191.6 |
| sulfonate abc transporter atp-binding protein | A8M77_12110 | Not Available | Negative | 2569059 - 2569841 | 29005.9 |
| abc transporter permease | A8M77_12115 | Not Available | Negative | 2569841 - 2570671 | 29649.1 |
| abc transporter permease | A8M77_12120 | Not Available | Negative | 2570715 - 2571680 | 34112.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
