Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | A8M77_11605 | Not Available | Negative | 2460060 - 2461178 | 40688.7 |
| metalloprotease tldd | A8M77_11610 | Not Available | Negative | 2461394 - 2462854 | 51355.1 |
| rod shape-determining protein roda | A8M77_11615 | Not Available | Negative | 2462896 - 2464050 | 41320.1 |
| esterase | A8M77_11620 | Not Available | Positive | 2464141 - 2464737 | 22548.0 |
| ribonuclease ii | A8M77_11625 | Not Available | Positive | 2464777 - 2466834 | 74210.5 |
| energy transducer tonb | A8M77_11630 | Not Available | Positive | 2466926 - 2467792 | 31654.8 |
| shikimate dehydrogenase | A8M77_11635 | Not Available | Positive | 2467807 - 2468649 | 29150.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | A8M77_11640 | Not Available | Positive | 2468646 - 2469482 | 31037.5 |
| Trna-gly | Not Available | Not Available | Positive | 2469520 - 2469595 | Not Available |
| acyl-phosphate glycerol 3-phosphate acyltransferase | A8M77_11650 | Not Available | Positive | 2469686 - 2470333 | 24013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
