Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | A8M77_09950 | Not Available | Negative | 2091160 - 2091954 | 27728.5 |
| oxidoreductase | A8M77_09955 | Not Available | Positive | 2092743 - 2093546 | 26527.2 |
| saccharopine dehydrogenase | A8M77_09960 | Not Available | Positive | 2093566 - 2094708 | 40752.9 |
| amp-dependent acyl-coa synthetase | A8M77_09965 | Not Available | Positive | 2094722 - 2096272 | 55403.6 |
| lipid-transfer protein | A8M77_09970 | Not Available | Positive | 2096269 - 2097453 | 41352.4 |
| 2-methylisocitrate lyase | A8M77_09975 | Not Available | Negative | 2097664 - 2098479 | 28522.8 |
| hypothetical protein | A8M77_09980 | Not Available | Positive | 2098578 - 2098781 | 7114.77 |
| hybrid sensor histidine kinase/response regulator | A8M77_09985 | Not Available | Negative | 2098801 - 2100603 | 64806.7 |
| dna-binding response regulator | A8M77_09990 | Not Available | Negative | 2100619 - 2101230 | 21409.3 |
| hypothetical protein | A8M77_09995 | Not Available | Positive | 2101392 - 2101667 | 9808.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
