Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | A8M77_09430 | Not Available | Positive | 1962241 - 1963950 | 63168.1 |
| 2-isopropylmalate synthase | A8M77_09435 | Not Available | Positive | 1963967 - 1965505 | 55259.5 |
| d-alanyl-d-alanine carboxypeptidase | A8M77_09440 | Not Available | Positive | 1965621 - 1966799 | 41820.4 |
| iclr family transcriptional regulator | A8M77_09445 | Not Available | Negative | 1966846 - 1967646 | 29105.2 |
| arginyltransferase | A8M77_09450 | Not Available | Negative | 1967679 - 1968428 | 28467.9 |
| leucyl/phenylalanyl-trna--protein transferase | A8M77_09455 | Not Available | Negative | 1968425 - 1969177 | 27489.0 |
| carbon monoxide dehydrogenase | A8M77_09460 | Not Available | Positive | 1969294 - 1971624 | 82329.3 |
| 4-hydroxybenzoate 3-monooxygenase | A8M77_09465 | Not Available | Negative | 1971640 - 1972821 | 43679.1 |
| iclr family transcriptional regulator | A8M77_09470 | Not Available | Positive | 1972954 - 1973724 | 28007.1 |
| dna-binding response regulator | A8M77_09475 | Not Available | Positive | 1973774 - 1974433 | 24637.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
