Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_08870 | Not Available | Negative | 1848203 - 1848619 | 14381.0 |
| hypothetical protein | A8M77_08875 | Not Available | Negative | 1848803 - 1849729 | 32394.9 |
| gamma-glutamylcyclotransferase | A8M77_08880 | Not Available | Positive | 1849758 - 1850171 | 14928.9 |
| isocitrate lyase | A8M77_08885 | Not Available | Positive | 1850398 - 1851717 | 48547.4 |
| arac family transcriptional regulator | A8M77_08890 | Not Available | Negative | 1851787 - 1852749 | 34888.2 |
| antibiotic biosynthesis monooxygenase | A8M77_08895 | Not Available | Positive | 1852865 - 1853176 | 11147.5 |
| threonine--trna ligase | A8M77_08900 | Not Available | Positive | 1853398 - 1855305 | 72567.9 |
| translation initiation factor if-3 | A8M77_08905 | Not Available | Positive | 1855479 - 1856012 | 19647.0 |
| 50s ribosomal protein l35 | A8M77_08910 | Not Available | Positive | 1856166 - 1856369 | 7447.43 |
| 50s ribosomal protein l20 | A8M77_08915 | Not Available | Positive | 1856393 - 1856752 | 13388.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
