Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | A8M77_00600 | Not Available | Positive | 110013 - 110651 | 22773.7 |
| chromosome partitioning protein parb | A8M77_00605 | Not Available | Positive | 110648 - 110911 | 9431.35 |
| transposase | A8M77_00610 | Not Available | Positive | 110908 - 111432 | 19291.5 |
| peptidase | A8M77_00615 | Not Available | Positive | 111429 - 112028 | 21533.3 |
| type vi secretion protein | A8M77_00620 | Not Available | Positive | 112506 - 114488 | 73206.2 |
| hypothetical protein | A8M77_00625 | Not Available | Negative | 114481 - 114786 | 10308.7 |
| hypothetical protein | A8M77_00630 | Not Available | Negative | 114796 - 115800 | 35358.7 |
| abc transporter permease | A8M77_00635 | Not Available | Negative | 115803 - 116675 | 30109.9 |
| abc transporter atp-binding protein | A8M77_00640 | Not Available | Negative | 116696 - 117412 | 25872.4 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | A8M77_00645 | Not Available | Negative | 117409 - 118176 | 27462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
